Job summary
Job ID
3MMG_172_56e94064af26a
PDB ID
3MMG_receptor.pdb
Chain
all
Binding site
172 and residues within 7.5 Å
Results
Backbone
scaffold
Representative
sequence
Average
FoldX energy
Sequence
logo
Show
complex
Download
complex
1 MQLD -12.0
2 MLVHP -11.8
3 MLVHPG -11.6
4 GKVKAN -11.1
5 GEKVRA -10.5
6 GKVGHA -10.2
7 ELAKAI -9.9
8 GGVRG -9.8
9 GKVKFD -9.8
10 GGKLKAE -9.8
11 TDYVRG -9.5
12 TDVCSLP -9.5
13 GSAGAE -9.4
14 IKVKG -9.2
15 PTLKAE -9.2
16 TLIIAD -8.7
17 TIKTG -8.7
18 VILEL -8.6
19 PESVKA -8.3
20 PGVRL -8.2
21 KLTFG -8.1
22 MKVG -8.1
23 LKIKLG -8.1
24 GTVCG -7.8
25 SRAGEG -7.8
26 GLGVTE -7.7
27 SKAAEG -7.7
28 DVVRG -7.7
29 TDACSY -7.6
30 GSVGAG -7.6
31 GKVKG -7.6
32 GSVGA -7.5
33 GMTEF -7.3
34 GDSVGC -7.2
35 PLCYEG -7.2
36 GGHTSSG -7.2
37 RIKG -7.2
38 MILG -7.1
39 HKCVEG -7.0
40 GKTSA -7.0
41 TDVASA -7.0
42 PEKVRA -6.9
43 GGHTG -6.7
44 TDGVKA -6.7
45 SRAAG -6.4
46 VGITE -6.4
47 GLHIMP -6.3
48 VGYFA -6.1
49 GRVKE -6.0
50 TEKVSG -6.0
51 GKTKAS -6.0
52 TGKVGI -6.0
53 ELAGA -5.6
54 ELVIA -5.4
55 GGKVKVG -5.4
56 GVKA -5.3
57 DLASA -5.2
58 LRGSG -5.1
59 TKHSA -4.9
60 TDKVAG -4.9
61 ELTIAD -4.6
62 RASE -4.5
63 PKHKM -4.5
64 GGKVTE -4.4
65 EVVGE -4.4
66 LGTG -4.3
67 PVITA -4.2
68 TAYVSQD -4.1
69 EKHKG -4.0
70 MGVAA -3.5
71 PKCAE -3.5
72 LTRAG -3.1
73 GGAAEG -3.1
74 TGLLSA -3.1
75 IRFE -3.0
76 GEVLKI -2.8
77 GASVG -2.7
78 PLNP -2.5
79 GVKA -2.3
80 ESVEIK -2.3
81 GGQG -2.2
82 PSRGG -2.2
83 TGKGTG -2.1
84 GYHKL -1.6
85 AKAH -1.6
86 KASE -1.5
87 GSRMKD -1.3
88 YEAA -1.1
89 GRGG -0.2
90 NVVGP -0.1

The binding site is highlighted in darkcyan (selected residue) and darkviolet (residues within the selected cutoff). The designed peptide is shown in sticks and is colored according to the CPK scheme.

Peptide sequences obtained from backbone scaffold 1
Peptide
sequence
FoldX
energy
Number of
sequences
Download
complex