Job summary
Job ID
4j8s_25_10_56f85d30ce305
PDB ID
4J8S_receptor.pdb
Chain
all
Binding site
25 and residues within 10 Å
Results
Backbone
scaffold
Representative
sequence
Average
FoldX energy
Sequence
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complex
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complex
1 SFVG -4.2
2 CPVV -3.9
3 STPG -3.7
4 PFVVSG -3.2
5 PMTKLY -2.8
6 ARVQP -2.4
7 TCVVT -1.9
8 PSTQG -1.9
9 PMRVG -1.8
10 PIIVHS -1.5
11 TCVG -1.3
12 STLG -1.2
13 PSSV -1.2
14 TVVF -1.1
15 GVAVI -1.0
16 PTRG -0.9
17 MEPG -0.9
18 PMVIRG -0.8
19 ARIG -0.8
20 TRTG -0.6
21 PGSG -0.3
22 PMYVSS -0.3
23 GTKPPTP -0.0
24 TTVG -0.0
25 TATG 0.1
26 SAVIL 0.1
27 QVAG 0.2
28 QVAG 0.3
29 STQK 0.3
30 PIIVTS 0.3
31 GLSR 0.4
32 GVSG 0.4
33 GSSG 0.4
34 GSAVA 0.8
35 VIVTS 0.8
36 TTDPSG 0.9
37 TVRG 1.0
38 TGSQG 1.0
39 PMYDNG 1.1
40 TTVVVG 1.1
41 TVVVG 1.4
42 PPQG 1.4
43 TGSK 1.4
44 TVVVG 1.4
45 SQPG 1.7
46 TTVLVY 1.8
47 VTVG 2.0
48 TPWIP 2.2
49 TKPPTP 2.2
50 TAIF 6.1
51 YSKRG 6.2
52 MSQG 10.3

The binding site is highlighted in darkcyan (selected residue) and darkviolet (residues within the selected cutoff). The designed peptide is shown in sticks and is colored according to the CPK scheme.

Peptide sequences obtained from backbone scaffold 1
Peptide
sequence
FoldX
energy
Number of
sequences
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complex